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Monitoring and Evaluation of COVID-19 Rapid Antigen Diagnostic Test Rollout in Africa
recommended

African Union; Africa CDC Centres for Disease Control and Prevention (2021) C1
Limited coverage of laboratory services and long turnaround times from real-time reverse transcription-polymerase chain reaction (rRT-PCR) for the detection of Severe Acute Respiratory Syndrome Coro... more
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Estimating COVID-19 vaccine effectiveness against severe acute respiratory infections (SARI) hospitalisations associated with laboratory-confirmed SARS-CoV-2

World Health Organization WHO (2021) C_WHO
Many critical questions remain about the effectiveness of COVID-19 vaccines in real-world settings. These questions can only be answered in post-introduction vaccine effectiveness studies.This guidance document outlines an approach to leverage exist... more
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Ending disease in Africa: vision, strategies and special initiatives, 2023-2030

World Health Organisation (WHO) (2023) C_WHO
While there has been real progress in addressing the burden of disease in the WHO African region, the COVID-19 pandemic has highlighted the link between health, economics and security, as the region saw decades of progress threatened, including posi... more
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Comparison of sensitivity and specificity of three diagnostic tests to detect Schistosoma mansoni infections in school children in Mwanza Region, Tanzania

Fuss, A.; H.D. Mazigo; D. Tappe, C.Kasang, A. Mueller (2018) CC
PLoS ONE 13(8): e0202499. https://doi.org/10.1371/journal.pone.0202499 This was a school-based cross-sectional study conducted in 2015 among 305 school children aged 7–16 years from two primary schools located in Ilemela and Magu Districts, north-western Tanzania. Single stool and urine samples w... more
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Risk Communication and Community Engagement Preparedness and Readiness Framework: Ebola Response in the Democratic Republic of Congo in North Kivu

World Health Organization WHO; UNICEF; IFRC, et al. (2018) CC
Risk Communication and Community Engagement (RCCE) is an essential part of any disease outbreak response. Risk communication in the context of an Ebola outbreak refers to real time exchange of infor... more
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Laboratory testing for the monkeypox virus
recommended

World Health Organization (WHO) (2022) C_WHO
Any individual that meets the suspected case definition of monkeypox should be offered testing in appropriately equipped laboratories by staff trained in the relevant technical and safety procedures. Confirmation of monkeypox virus infection is based on nucleic acid amplification testing (NAAT), usi... more
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Antimicrobial resistance and primary health care

World Health Organization WHO (2018) C_WHO
Despite the considerable improvement in global health, millions of people still lack access to quality health services, including access to effective antimicrobial medicines, or are impoverished as a result of health spending. At the same time, anti... more
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ECDC/EFSA/EMA second joint report on the integratedanalysis of the consumption of antimicrobial agents andoccurrence of antimicrobial resistance in bacteria fromhumans and food-producing animals

European Centre for Disease Prevention and Control (ECDC), European Food Safety Authority (EFSA) andEuropean Medicines Agency (EMA) (2017) C_CDC
The second ECDC/EFSA/EMA joint report on the integrated analysis of antimicrobial consumption (AMC) and antimicrobial resistance (AMR) in bacteria from humans and food-producing animals addressed data obtained by the Agencies’ EU-wide surveillance... more
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Mpox Testing Strategy - November 2024

Africa Center for Disease Control and Prevention (2024) CC
Mpox is an emerging zoonotic disease caused by the mpox virus, a member of the Orthopoxvirus genus closely related to the variola virus that causes smallpox. Mpox was first discovered in 1958 when outbreaks of a pox-like disease occurred in monkeys kept for research. The first human case was recorde... more
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National Technical Guidelines for Integrated Disease Surveillance and Response

Federal Ministry of Health, Uganda (2021) C1
3rd edition
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National Technical Guidelines for Integrated Disease Surveillance and Response Liberia

Ministry of Health, Liberia, World Health Organization (WHO), and Centers for Disease Control and Prevention (CDC) (2021) C_WHO
3rd edition
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National Guidelines for Integrated Diseases Surveillance and Response Uganda

World Health Organization WHO, Regional Office of Africa; Ministry of Health Uganda (2021) C_WHO
3rd edition. In 2001, Uganda adapted the Integrated Disease Surveillance and Response (IDSR) developed by World Health Organization (WHO) for member states in African region. The Ministry of Health has been implementing the IDSR strategy since then ... more
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HIV Sentinel Surveillance 2012-13 - A Technical Brief

NACO (2013)
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Conducting HIV surveillance based on routine programme data among pregnant women attending antenatal clinics

J. M. Garcia Calleja; J. Dee; L. Newman; et al. World Health Organization; UNAIDS (2015) C_WHO
Guidelines UNAIDS/WHO working group on global HIV/AIDS and STI surveillance August 2015 HIV strategic information for impact
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Influenza Surveillance Among Children With Pneumonia Admitted to a District Hospital in Coastal Kenya, 2007–2010

Clayton O. Onyango, Regina Njeru, Sidi Kazungu et al. (2012) CC
J Infect Dis. (2012) 206 (suppl. 1): S61-S67 Influenza data gaps in sub-Saharan Africa include incidence, case fatality, seasonal patterns, and associations with prevalent disorders. The authors found that the burden of influenza was small during 2007–2010 in this paediatric hospital in Kenya. In... more
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Public health surveillance for COVID-19: interim guidance 16 December 2020 (Arab Version)
recommended

World Health Organization WHO (2020) C_WHO
This document summarizes current WHO guidance for public health surveillance of coronavirus disease 2019 (COVID-19) in humans caused by infection with severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) (hereafter referred to as COVID19 ...). more
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Cadre continental sur le renforcement des systèmes de surveillance de la mortalité en Afrique

Africa Center for Disease Control and Prevention (2023) CC
L'importance de systèmes de surveillance de la mortalité robustes ne peut être surestimée à une époque marquée par des défis sanitaires mondiaux croissants, où les menaces sanitaires pèsent lourd et la dynamique des populations continue d'... more
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WHO Global Epidemiological Surveillance Standards for Influenza

World Health Organization WHO (2014) C_WHO
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Introduction of Mobile Health Tools to Support Ebola Surveillance and Contact Tracing in Guinea

Jilian A Sacks, Elizabeth Zehe, Cindil Redick et al. (2015) CC
Global Health Science and Practice. First published online November 12, 2015
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Zika virus (ZIKV) Surveillance in the Americas: Laboratory detection and diagnosis
recommended

Pan American Health Organization PAHO; World Health Organization, Regional Office for the Americas (2016) C_WHO
This algorithm is addressed to laboratories with established capacity(molecular, antigenic and/orserological) to detect dengue (DENV), Zika (ZIKV), and chikungunya(CHIKV) as part of the differential diagnosis for arborviruses. A BSL2 containment level is required to handle suspected samples.