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Publication Years
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Manual of Basic Techniques for a Health Laboratory
recommended

World Health Organization WHO (2003) C_WHO
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Zika virus (ZIKV) Surveillance in the Americas: Laboratory detection and diagnosis
recommended

Pan American Health Organization PAHO; World Health Organization, Regional Office for the Americas (2016) C_WHO
This algorithm is addressed to laboratories with established capacity(molecular, antigenic and/orserological) to detect dengue (DENV), Zika (ZIKV), and chikungunya(CHIKV) as part of the differential diagnosis for arborviruses. A BSL2 containment level is required to handle suspected samples.
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Philippines: National tuberculosis control program laboratory network strategic plan 2013-2016

Noel G. Macalalad, Ma. Cecilia G. Ama, Arthur B. Lagos et al. Research Institute for Tropical Medicine National Tuberculosis Reference Laboratory (2013) C1
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Sierra Leone National Rapid Assessment of Laboratory Capacity and Systems: Sub-Report

Ministry of Health and Sanitation, Sierra Leone (2016) C1
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Framework of Indicators and Targets for laboratory strengthening under the end tb strategy

World Health Organization (2016) C_WHO
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National Guidelines for HIV-1 Viral Load Laboratory Testing
recommended

Government of India, Ministry of Health and Family Welfare, National AIDS Control Organisation (NACO) (2018) C1
The National Guidelines for HIV-1 Viral Load Laboratory Testing support plans to scale up viral load (VL) testing to reach the 90-90-90 targets in India. This phased scale-up includes the setup of 70 additional VL testing laboratories nationally. Th ... more
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Specifications and quantities for efficient procurement of essential equipment and laboratory commodities for HIV

Francis Aboagye-Nyame, Heather Alexander, Zelalem Gizachew Belachew et al. World Health Organization (2015) C_WHO
Second Edition AIDS Medicines and diagnostics services July 2015
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Interim guidance for healthcare providers and Zika virus laboratory diagnosis
recommended

European Centre for Disease Prevention and Control (2016) C1
This document aims to present an algorithm for deciding whom to test and provide guidance on the laboratory tests for Zika virus infection diagnosis in order to support clinical diagnostic and case reporting through surveillance among EU Member Stat ... more
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India: Training Module for Senior Treatment Supervisor and Senior TB Laboratory Supervisor on TB/HIV Coordination

Central TB Division, National AIDS Control Organization (NACO) (2005) C1
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Considerations for adoption and use of multidisease testing devices in integrated laboratory networks

World Health Organization (2017) C_WHO
Information note.
This information note provides a strategic overview of key implementation considerations for diagnostic integration using these devices, and is primarily intended for use by national laboratory services and TB, HIV, and hepati ... more
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The Surveillance of Antimicrobial Resistance Using Public Health Laboratory-Based Sentinel Sites in Ethiopia 2016-2020

The Ethiopian Public Health Institute (2017) CC
Ethiopia Antimicrobial Resistance Surveillance Plan
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Guia para la Vigilancia por laboratorio de Tuberculosis (Guide for Tuberculosis laboratory surveillance)

Directorate of Public Health and the Mycobacteria Group Min de Salud Colombia (2020) CC
OBJETIVO DE LA GUÍA Describir los lineamientos técnicos de la vigilancia de tuberculosis por el laboratorio, así como los procesos de obtención, recolección, procesamiento, transporte y conservación de muestras, y las funciones que se realizan y articulan por todos los integra ... more
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Line probe assays for detection of drug-resistant tuberculosis: interpretation and reporting manual for laboratory staff and clinicians

World Health Organization WHO (2022) C_WHO
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Management of a cholera epidemic - Practical guide for doctors, nurses, laboratory technicians, medical auxiliaries, water and sanitation specialists and logisticians
recommended

Médecins Sans Frontières MFS (2023) CC
Cholera is a transmissible diarrhoeal infection caused by Vibrio cholerae. Endemic and/or epidemic in over 40 countries (mainly in Africa and Asia), cholera continues to be a major global public health issue. The World Health Organization (WHO) estimates that the number of cases reported worldwid ... more
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Sierra Leone: Cumulative confirmed Ebola Cases, Laboratory Data, 23 May 2014 - 20 January 2015

Government of Sierra Leone; Centers for Disease Control and Prevention (2015)
 External Link
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Standard treatment guidelines, essential medicines list , essentia laboratory supplies for Zambia
recommended

Ministry of Health, Zambia (2020) C1
5th edition
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Estimating COVID-19 vaccine effectiveness against severe acute respiratory infections (SARI) hospitalisations associated with laboratory-confirmed SARS-CoV-2

World Health Organization WHO (2021) C_WHO
Many critical questions remain about the effectiveness of COVID-19 vaccines in real-world settings. These questions can only be answered in post-introduction vaccine effectiveness studies.This guidance document outlines an approach to leverage existing surveillance systems for Severe Acute Respirato ... more
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Leishmaniasis Workup: Approach Considerations, Routine Laboratory Studies, Biopsy and/or Aspiration

Medscape (2023) C2
Website last accessed on 04.06.2023
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India: Provider Initiated Testing and Counselling for presumptive TB Cases and TB Patients (PITC): Training Manual for Laboratory Technicians

Central TB Division Ministry of Health and Family Welfare, Government of India; NACO (2016) C1
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Putting HIV and HCV to the test - A product guide for point-of-care CD4 tests and laboratory-based and point-of-care HIV and HCV viral load tests

Medecins Sans Frontieres (Access Campaign) (2017) C2
3rd Edition – July 2017 www.msfaccess.org
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GLI Quick guide to TB diagnostics connectivity solutions

Global Laboratory Initiative World Health Organization (2016) C_WHO
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GLI model TB diagnostic algorithms

Global Laboratory Initiative World Health Organization (2015) C_WHO
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Training Package on XPERT MTB/RIF

USAID; WHO; FIND; et al. global laboratory initiative (2017) C_WHO
The modules (1-12) are based on materials originally developed by FIND, KNCV and Cepheid, and are in PowerPoint format for country customization. Depending on the audience, modules may be selected and adapted according to need (e.g. basic users, supervisors, clinicians). Topics covered include: Over ... more
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Module de formation sur XPERT MTB/RIF

USAID; WHO; FIND; et al. global laboratory initiative (2017) C_WHO
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Pacote de formação sobre o Xpert MTB/RIF

USAID; WHO; FIND; et al. global laboratory initiative (2017) C_WHO
The modules (1-12) are based on materials originally developed by FIND, KNCV and Cepheid, and are in PowerPoint format for country customization. Depending on the audience, modules may be selected and adapted according to need (e.g. basic users, supervisors, clinicians). Topics covered include: Over ... more
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Training Package on XPERT MTB/RIF (Russian edition)

USAID; WHO; FIND; et al. global laboratory initiative (2017) C_WHO
Комплект учебных материалов по Xpert MTB/RIF The modules (1-12) are based on materials originally developed by FIND, KNCV and Cepheid, and are in PowerPoint format for country customization. Depending on the audience, modules may be selected and adapted according to nee ... more
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Planning for country transition to Xpert MTB/RIF Ultra Cartridges

Global Laboratory Initiative (2017) C2
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Sobre tuberculosis (TB) y su diagnóstico (Módulo 1)

Global Laboratory Initiative; USAID; WHO; et al. (2017) C1
Iniciativa Global de Laboratorio – Entrenamiento en Xpert MTB/RIF Accessed December 2017 Por favor descargue los 12 módulos todos
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GLI Guide to TB Specimen Referral Systems and Integrated Networks

Global Laboratory Initiative (GLI), Stop TB Partnership (2018) C1
This guide includes information relevant for tuberculosis (TB) program and laboratory managers, as well as Ministry of Health officials across disease programs interested in establishing integrated solutions for specimen referral. Though TB-focused ... more
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Disability in Bangladesh: A Situation Analysis

The Danish Bilharziasis Laboratory for the World Bank, People’s Republic of Bangladesh (2004) C1
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Expanding Access to Point-of-Care Early Infant Diagnosis: Implementation Approaches and Testing Strategies

American Society for Laboratory Medicine (ASLM); Clinton Health Access Initiative; Elizabeth Glaser Pediatric Health Foundation; et al. American Society for Laboratory Medicine (ASLM); Clinton Health Access Initiative; Elizabeth Glaser Pediatric Health Foundation; et al. (2018) C2
October 2018
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medRxiv- The preprint server for health sciences
recommended

Cold Spring Harbor Laboratory; BMJ; Yale (2020) C1
Preprints are preliminary reports of work that have not been certified by peer review. They should not be relied on to guide clinical practice or health-related behavior and should not be reported in news media as established information. COVID-19 SARS-CoV-2 preprints from medRxiv and bioRxiv
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SARS-COV-2 Antigen Rapid Diagnostic Test Training
recommended

African Society for Laboratory Medicine ASLM (2021) C1
SARS-COV-2 antigen rapid diagnostic tests are an alternative option for diagnosing active SARS-CoV-2 infection through detection of viral proteins. Rapid antigen tests revolutionize the response to COVID-19 by providing accurate test results in 10 to 20 minutes instead of days, allowing tests to be ... more
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COVID-19 Diagnostics
recommended

African Society for Laboratory Medicine ASLM (2021) CC
ASLM strives to keep laboratory networks in Africa connected and informed of diagnostic tools, techniques, procedures and advancements related to COVID-19 testing with interactive training and information sessions using the Extended Community Health ... more
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NOAA's Climate Change Web Portal: CMIP5

NOAA Physical Sciences Laboratory (PSL) (2022) CC
The NOAA Physical Sciences Laboratory (PSL) conducts research to improve observations, understanding, modeling and predictions of weather, water and climate extremes, and their related impacts.
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Does the patient meet the case definition for a COVID-19 case?

Nation Institute for Communicable Diseases - Division of the National Health Laboratory Service Department: Health Republic of South Africa (2020) C2
Persons with acute respiratory illness with sudden onset of at least one of the following: cough, sore throat, shortness of breath or fever [≥ 38°C (measured) or history of fever (subjective)] irrespective of admission status AND In the 14 days prior to onset of symptoms, met at least one of the ... more
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Coronavirus Disease 2019 (COVID-19) Quick Reference for Clinical Health Care Workers

NICD, National Health Laboratory Services National Department of Health South-Africa (2021) CC
Quick reference guide
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Overview of the WHO Prequalification of Male Circumcision Devices assessment

World Health Organization (WHO); Diagnostics and Laboratory Technology World Health Organization (WHO); Diagnostics and Laboratory Technology (2011) C_WHO
Prequalification of Male Circumcision Devices PQMC_007 v1 16 December 2011
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Fascioliasis - The trematodes Fasciola hepatica

Center for Disease Control and Prevention CDC; DPDx-Laboratory Identification of Parasites of Public Health Concern (2019) C_CDC
The trematodes Fasciola hepatica (also known as the common liver fluke or the sheep liver fluke) and Fasciola gigantica are large liver flukes (F. hepatica: up to 30 mm by 15 mm; F. gigantica: up to 75 mm by 15 mm), which are primarily found in domestic and wild ruminants (their main definitive host ... more
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Waste Category and Colour-Coding Table

Ministry of Health. Environmental Health Department and Swaziland Health Laboratory Services (SHLS). The Goverment of the Kingdom of Swaziland (2015) C1
Accessed 3rd of October 2015
 External Link
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Hep B Help - Resources for Patients

Hepatitis B Program, Epidemiology Unit, Victorian Infectious Diseases Reference Laboratory (VIDRL), based at The Doherty Institute (2015) C2
Hep B Help colates a number of Hepatitis B fact sheet and other resources for patient education. Accessed 13th of November 2015.
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Budgeting application tool

UNITAID, WHO, Global Laboratory Initiative, et. al (2015) C_WHO
User manual.
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Budgeting application tool. (Russian Version)
recommended

UNITAID, WHO, Global Laboratory Initiative, et. al (2015) C_WHO
ПРИЛОЖЕНИЕ ДЛЯ СОСТАВЛЕНИЯ БЮДЖЕТА. РУКОВОДСТВО ПОЛЬЗОВАТЕЛЯ.
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Zambia DHS 2013-14 - Infographic (English)

Central Statistical Office (CSO), Ministry of Health, University Teaching Hospital (UTH)-Virology Laboratory, Tropical Diseases Research Centre (TDRC), Department of Population Studies at the University of Zambia (UNZA) ICF International (2015) C2
FAST FACTS FROM THE 2013-14 ZAMBIA DEMOGRAPHIC AND HEALTH SURVEY
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The regulatory and certification framework for institutions handling high risk pathogens in the Africa Region

African Union; Africa CDC Centres for Disease Control and Prevention (2022) CC
he Framework sets the requirements for facilities handling High Consequence Agents and Toxins (HCATs) and guides the implementation of laboratory biosafety and biosecurity practices associated with the design, commissioning, routine operation safe a ... more
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Xpert MTB/RIF test

FIND (2017) C2
Laboratory monitoring & evaluation tool Xpert Pre-installation Checklist Accessed December 2017
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Assessment tool for laboratories implementing SARS-CoV-2 testing: Interim Guidance

World Health Organization WHO (2020) C_WHO
User Guide. This Laboratory Assessment Tool (LAT) is specifically designed to assess capacities of existing laboratories which have implemented or aim to implement SARS-CoV-2 testing. It addresses both core capacities of a ... more
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Interim Guidance on the Use of Rapid Antibody Tests for COVID-19 Response
recommended

African Union; Africa CDC Centres for Disease Control and Prevention (2020) CC
The speed of developing diagnostics for SARS-CoV-2, the causative agent of coronavirus disease 2019 (COVID-19), has been quite remarkable. Diagnostics have focused on nucleic acid amplification testing (NAAT) to identify infected individuals in acute-phase disease for timely implementation of mitiga ... more
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Holistic response strategies for COVID-19

World Health Organization WHO (2020) C_WHO
This document outlines minimum requirements of laboratory testing for COVID-19 and link laboratory testing with surveillance and contact tracing to guide the outbreak response by national health aut ... more
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Manual de seguridad en el laboratorio. Edición mundial
recommended

Organización Mundial de la Salud OMS; GLI OPS (2022) C_WHO
Laboratory Safety Handbook. Global edition Las pruebas de cultivo y sensibilidad a fármacos son necesarias especialmente para los pacientes con riesgo de tuberculosis resistente a los medicamentos y para vigilar su respuesta al tratamiento. Si b ... more
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WHO BioHub system: biosafety and biosecurity: criteria and operational modalities

World Health Organization WHO (2022) C_WHO
The WHO BioHub Biosafety & Biosecurity: criteria and operational modalities sets out the requirements to which laboratories wishing to receive biological materials as part of this international exchange system should abide, to ensure safe and secure operations. These provisions are in accordance wit ... more
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Report of a WHO–FIND meeting on diagnostics for Buruli ulcer

WHO Tecnical Advisory Group and FIND (2018) CC
The meeting was held from 26 to 27 March 2018 to review and discuss the following topics: Advances and challenges in the use of fTLC, and new approaches to detecting mycolactone using monoclonal antibodies (mAbs). The status of development of rapid diagnostic tests (RDTs) targeting the MUL ... more
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Tobacco product regulation

World Health Organization; Together lets beat Tobacco (2018) C_WHO
Building laboratory testing capacity
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American Trypanosomiasis

Centers for Disease Control and Prevention CDC (2021) C_CDC
DPDx - Laboratory Identification of Parasites of Public Health Concern Trypanosoma cruzi, is a parasitic protozoan that is the causative agent of Chagas disease (American trypanosomiasis). Currently, six distinct lineages of T. cruzi are classified ... more
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Testing Algorithm Zika Infection

Bernhard Nocht Institute for Tropical Medicine (2016) C1
When is laboratory testing for Zika Virus infection reasonable? Testing algorithm for patients with and without symptoms.
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A systematic review of healthcare-associated infections in Africa: An antimicrobial resistance perspective

Emmanuel O. Irek, Adewale A. Amupitan, Temitope O. Obadare, Aaron O. Aboderin (2018) CC
African Journal of Laboratory Medicine | Vol 7, No 2 | a796 | 06 December 2018
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Antimicrobial resistance surveillance in Ethiopia: Implementation experiences and lessons learned

Rajiha A. Ibrahim, Amete M. Teshal, Surafel F. Dinku, et al. (2018) CC
African Journal of Laboratory Medicine | Vol 7, No 2 | a770 | 06 December 2018
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WHONET | Community website

World Health Organization WHO (2019) C_WHO
The microbiology laboratory database software. WHONET is a desktop Windows application for the management and analysis of microbiology laboratory data with a particular focus on antimicrobial resis ... more
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Antimicrobial resistance surveillance in Africa: Successes, gaps and a roadmap for the future

Kariuki S., K. H. Keddy, M. Antonio AOSIS (2018) C2
Since the World Health Organization (WHO) launched the Global Antimicrobial Resistance Surveillance System (GLASS) in 2015, there has been rapidly growing awareness among many African countries that they need to be doing more to combat antimicrobial resistance (AMR). The Africa Centres fo ... more
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Monitoring and Evaluation of COVID-19 Rapid Antigen Diagnostic Test Rollout in Africa
recommended

African Union; Africa CDC Centres for Disease Control and Prevention (2021) C1
Limited coverage of laboratory services and long turnaround times from real-time reverse transcription-polymerase chain reaction (rRT-PCR) for the detection of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) has been insufficient to mee ... more
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Protocolo para el diagnostico por laboratorio de COVID_19, en el marco de la emergencia sanitaria

Ministerio de Salud Bolivia Ministerio de Salud Bolivia (2020) CC
Protocol for laboratory diagnosis of COVID_19, in the framework of the health emergency
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Drug-resistant tuberculosis: how to interpret rapid molecular test results

World Health Organisation (2020) C_WHO
This training toolkit by the European Laboratory Initiative for TB, HIV and Viral Hepatitis provides a unique combination of practical guidance and expert advice on the interpretation of selected WHO-endorsed tests for drug-resistant tuberculosis (D ... more
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Tropical Medicine Point-of-Care Testing. Update 2022
recommended

Cheesbrough, M. THT Books (2022) C1
To meet the need for laboratory diagnosis to be integrated in community care, the new 2022 Update describes point-of-care tests that can be performed both in district laboratories and peripheral healthcare facilities by non-specialist staff. Also in ... more
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Guide for providing technical support to TB laboratories in low- and middle-income countries online training

FIND (2015) C1
This online training is based on the Global Laboratory Initiative’s “Guide for providing technical support to TB laboratories in low- and middle-income countries”. This guide is intended to familiarize those who are providing technical assista ... more
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Diagnostics Catalog August 2018

Global Drug Facility World Health Organization WHO, Stop TB (2018) C_WHO
Stop TB`s GDF provides a wide range of diagnostic equipment and laboratory supplies in its Diagnostics Catalog
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Management of a cholera epidemic
recommended

Médecins sans Frontières MSF (2018) C1
Practical guide for doctors, nurses,laboratory technicians, medical auxiliaries,water and sanitation specialists and logisticians
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Orientaciones sobre la bioseguridad en el laboratorio relacionada con la COVID-19
recommended

Organización Mundial de la Salud OMS (2021) C_WHO
The latest update (28 January 2021) includes the following addition and revision: biosafety aspects for working with antigen-detecting rapid diagnostic test; handling new variants of SARS-CoV-2 in the laboratory; updated assay decon ... more
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Практическое руководство по биологической безопасности в лабораторных условиях в связи с коронавирусной инфекцией (COVID-19)
recommended

World Health Organization WHO (2021) C_WHO
The latest update (28 January 2021) includes the following addition and revision: biosafety aspects for working with antigen-detecting rapid diagnostic test; handling new variants of SARS-CoV-2 in the laboratory; updated assay decon ... more
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Why Are Environmental Health Services So Important?

Centers for Disease Control and Prevention (CDC) (2018) CC
How does environmental health services work with epidemiology and laboratory professionals to protect public health? Learn how environmental health services answer how and why a disease occurs, recommend actions to stop outbreaks and prevent future ... more
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Validación e implementación de GeneXpert MTB/RIF para diagnóstico de tuberculosis en Ecuador

Ortiz-Jiménez; J.; G. Franco-Sotomayor; M. Ramos-Ramirez Kasmera (2019) CC
The objective of the study was the validation and implementation of GeneXpert MTB/RIF for routine use in the rapid detection of tuberculosis and sensitivity to rifampicin in clinical samples; for this, 1592 respiratory samples were collected and analyzed in the ... more
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Buruli ulcer : diagnosis of Mycobacterium ulcerans disease : a manual for health care providers

F. Portaels; Johnson, P.; Meyers, W. World Health Organization WHO (2001) CC
This manual is to assist health care providers and laboratory scientists to diagnose mycobacterium ulcerans disease (Buruli ulcer). The manual aims to achieve a better understanding of the clinical presentation and its diagnosis. The methods describ ... more
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Malaria microscopy quality assurance manual – Ver. 2

World Health Organization WHO (2016) C_WHO
This manual is designed primarily to assist managers of national malaria programmes and national reference laboratory responsible for quality assurance of malaria microscopy control. The information is also applicable to non-governmental organizatio ... more
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Botswana: National Policy on Blood Transfusion

Ministry of Health, Gabarone, Botswana (2000) C2
Department of Technical Support Services, Division of Laboratory Services, Ministry of Health
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Cluster of presumptive Ebola cases in North Kivu in the Democratic Republic of the Congo

World Health Organization WHO (2018) C_WHO
The Government of the Democratic Republic of the Congo announced today that preliminary laboratory results indicate a cluster of cases of Ebola virus in North Kivu province. The announcement was issued little more than a week after the Ministry of H ... more
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Guidelines for the Structure of Public Health Entomology Laboratories

Pan American Health Organization (PAHO) (2019) C_WHO
This document provides countries with recommendations for structuring a public health entomology laboratory network. The document will help countries to identify their areas of need and determine how the entomology network can be strengthened, espec ... more
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Corona Crash Course Unit 6 - COVID-19 and Testing
recommended

Jesuit Worldwide Learning (2021) C1
In this unit we will learn about COVID-19 and Testing - the role of the laboratory in the pandemic. Jesuit Worldwide Learning invites you to learn facts and test your knowledge on the ongoing pandemic caused by Coronavirus (COVID 19) through a fun- ... more
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Management of a cholera epidemic (Arabic)
recommended

Médecins sans Frontières MSF (2017) C1
Practical guide for doctors, nurses,laboratory technicians, medical auxiliaries,water and sanitation specialists and logisticians. Online version
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Operational guidance on the use of yellow fever assays in the context of surveillance

World Health Organization WHO (2023) C_WHO
This publication aims to provide updated guidance on the specific use of yellow fever laboratory assays in the context of surveillance to be used across the Global Yellow Fever Laboratory Network fo ... more
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Management of a Measles Epidemic
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Corinne Danet, and Florence Fermon Médecins Sans Frontières (2013) C1
Practical guide for doctors, nurses, laboratory technicians, medical auxiliaries and logisticians
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National Guidelines on Second-line ART for Adults and Adolescents India

National AIDSControl (NACO), Government of India; Ministry of Health and Family Welfare (2011) C1
This resource consists of technical guidelines for District Medical Officers, counselors and laboratory technicians for second-line antiretroviral therapy drugs, operational guidelines for pilot roll-out in two centres and ... more
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Standard Operating procedures for Immunophenotyping of Hematolymphoid Neoplasms

Indian Council of Medical Research (ICMR) (2016) C1
Prepared as an outcome of ICMR Expert Group on Immunophenotyping of Hematolymphoid Neoplasms | Coordinated by Division of Non Communicable Diseases | This document addresses on various issue related to good quality practices in laboratory work up of ... more
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Prevalence of TB/HIV Co-Infection in Countries Except China: A Systematic Review and Meta-Analysis

J. Gao; P. Zheng; Hua Fu PLOS One; PMC (2013) CC
School of Public Health, Fudan University, Key Laboratory of Public Health Safety, Ministry of Education, Shanghai, China PLOS ONE | www.plosone.org 1, May 2013 | Volume 8 | Issue 5 | e64915
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Protocol for assessment of potential risk factors for 2019-novel coronavirus (2019-nCoV) infection among health care workers in a health care setting
recommended

World Health Organization WHO (2020) C_WHO
This is a case-ascertained prospective investigation of all identified health care contacts working in a health care facility in which a laboratory confirmed 2019-nCoV infected patient (see 2.2 Study population) receives care. Note that this study c ... more
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Household transmission investigation protocol for 2019-novel coronavirus (2019-nCoV) infection
recommended

World Health Organization WHO (2020) C_WHO
The household transmission investigation is a case-ascertained prospective study of all identified household contacts of a laboratory confirmed 2019-nCoV infection (see 2.2 Study population). It is intended to provide rapid and early information on ... more
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COVID-19: Training slides based on guidelines for case-finding, diagnosis, management and public health response in South Africa

Centre for Respiratory Diseases and Meningitis and Outbreak Response National Department of Health, South Africa (2020) C2
Outline • Welcome and objectives • Microbiology, epidemiology and clinical presentation • Surveillance for imported cases including case definitions • Laboratory diagnosis • Infection prevention and hospital readiness • Patient ... more
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Overview of the antimicrobial resistance surveillance systems for Ghana, Malawi, Nepal and Nigeria

Dacombe R., I. Bates, B. Gopul et al. Liverpool School of Tropical Medicine (2016) C2
This study addresses part of the Terms of Reference for a scoping report ‘An analysis of approaches to laboratory capacity strengthening for drug resistant infections in low and middle income countries’. It has been produced as a separate report ... more
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Antigen-detection in the diagnosis of SARS-CoV-2 infection
recommended

World Health Organization WHO (2021) C_WHO
Interim guidance, 6 October 2021 Direct detection of SARS-CoV-2 viral proteins (antigens) in nasal swabs and other respiratory secretions using lateral flow immunoassays (also known as rapid diagnostic tests, RDTs) offers a faster and less expensive method to test for SARS-CoV-2 than the reference ... more
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Guidance for SARS-CoV-2 samples selection for genomic characterization and surveillance

Pan American Health Organisation PAHO (2021) C_WHO
Genomic sequencing has been an essential tool in generating virological data, driving the laboratory response, and better understanding the dispersal and evolutionary patterns of SARS-CoV-2. In addition to the characterization of the global circulat ... more
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Use of alternative interferon-gamma release assays for the diagnosis of TB infection: WHO policy statement

World Health Organization WHO (2022) C_WHO
Following review of evidence and advice from the Technical Advisory Group (TAG) on Tuberculosis (TB) Diagnostics and Laboratory Strengthening, the World Health Organization (WHO) announces that current WHO recommendations for the use of interferon- ... more
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Methods for the detection and characterisation of SARS-CoV-2 variants: second update, 21 June 2022

World Health Organization WHO, Regional Office of Europe (2022) C_WHO
This document aims to provide interim guidance for microbiology and virology experts, other laboratory professionals, laboratory managers, infectious disease programme managers, public health profes ... more
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An update on rabies in South Africa, 2021

National Institute for Communicable Disease NICD (2021) CC
As of 14 December 2021, a total of 19 laboratory-confirmed human rabies cases has been reported in South Africa for 2021. The cases are from Eastern Cape, KwaZuluNatal and Limpopo provinces. In addition, four probable rabies cases were reported from ... more
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The Africa Pathogen Genomics Initative (Africa PGI) Integrated Genomic Surveillance for Outbreak Detection (DETECT)

Africa Center for Disease Control and Prevention (2024) CC
Africa CDC Institute of Pathogen Genomics (IPG) was launched in November 2019 and operates under the Division of Laboratory Systems and Networks. IPG coordinate the implementation of molecular diagnostics, pathogen genomics and bioinformatics in Na ... more
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Training Manual on Diagnosis of Intestinal Parasites

WHO (1998) C_WHO
based on the WHO Bench Aids for the diagnosis of intestinal parasites; Tutor’s Guide: perform specific laboratory techniques; identify intestinal parasites by genus and species; quantify helminth eggs in faeces by Kato-Katz procedure.
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Responding to a polio outbreak. Guidelines
recommended

Polio Global Eradication Intiative (2011)
The occurrence of a case of wild polio in a previously polio free area as presently in Syria, whether through importation, laboratory accident, or mutation of vaccine virus (VDPV), should be considered a public health emergency, that requires a rapi ... more
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National List of Essential Medicines for Adults. NEML, 6th edition, 2015 - Rwanda

Ministere de la Sante, Rwanda (2010) C_WHO
The 6th edition of the essential medicine list has been developed based on the 5th edition list of essential medicines, the National Standard Treatment Guidelines and Protocols 2013, list of laboratory commodities and List of Consumables used in pub ... more
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Package and approaches in areas of intense transmission of Ebola virus

World Health Organization (2014)
Ebola interventions: The intervention to combat Ebola aims to stop human-to-human transmission. The package is composed of five elements necessary to control the spread of the disease: care to patients, contact monitoring, safe burials, laboratory ... more
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Worldwide country situation analysis: response to antimicrobial resistance

World Health Organization (2015) C_WHO
A survey was conducted in countries in all six WHO regions and focused on the building blocks that are considered prerequisites to combat antimicrobial resistance: a comprehensive national plan, laboratory capacity to undertake surveillance for resi ... more
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Biostatistics: CD-ROM for self learning
recommended

World Health Organization (2015) C_WHO
The main objective of this self learning programme is to understand the purpose of biostatistics through realistic cases and to acquire basic biostatistics skills that can be applied to your work. The target audiences of this training are medical and biomedical students, ... more
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Screening, assessment and management of neonates and infants with complications associated with Zika virus exposure in utero

World Health Organization WHO (2016) C_WHO
This Rapid Advice Guideline updates the Interim Guidance on the “Assessment of infants with microcephaly in the context of Zika virus” published in February 2016 (WHO/ZIKV/MOC/16.3). The recommendations provides guidance on the screening, clinical assessment, neuroimaging, ... more
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Xpert MTB/RIF test Rollout and Implementation Plan

National Tuberculosis and Leprosy Programme Ministry of Health and Social Welfare, Tanzania (2016) C1
The overall objective of this implementation plan is to define the strategy for implementation of the Xpert MTB/RIF test for rapid detection of TB and rifampicin (RIF) resistance in Tanzania, within the context of the National Tuberculosis and Leprosy Programme (NTLP) strategic plan and other nation ... more