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The Africa Pathogen Genomics Initative (Africa PGI) Integrated Genomic Surveillance for Outbreak Detection (DETECT)

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Africa CDC Institute of Pathogen Genomics (IPG) was launched in November 2019 and operates under the Division of Laboratory Systems and Networks. IPG coordinate the implementation of molecular diagnostics, pathogen genomics and bioinformatics in National Public Health Institutions (NPHIs) and/or Re... more
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According to the World Health Organization (WHO), sub-Saharan Africa has only 3% of the world’s health workers to cater for 11% of the world population, bearing over 25% of the global disease burden (WHO, 2014). With a steady increase in reported cases on the African Continent, the current COVID-1... more
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Recommendations for Stepwise Response to COVID-19

African Union; Africa CDC Centres for Disease Control and Prevention; AMREF; ASLM; et al. (2020) C2
March 2020 This document provides a high-level mapping of outbreak stages with guidance on how to time the minimum uptake of different interventions that have been recommended by Africa CDC, driven by evidence and science.
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Strategies for managing acute shortages of personal protective equipment during COVID-19 pandemic
recommended

African Union; Africa CDC Centres for Disease Control and Prevention (2020) C1
This guidance provides considerations and a series of options that can be used to inform country strategies in managing any shortages of personal protective equipment.Re-use and reprocessing of single-use PPE must be a last resort temporary measure to be adopted until stocks are replenished. The WH... more
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Framework for Supply Chain Management for Public Health Emergency Preparedness and Response

African Union; Africa CDC Centres for Disease Control and Prevention (2021) CC
1 February 2021
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Action Protocol for Enhanced SARI and ILI Surveillance for COVID-19 in Africa

African Union; Africa CDC Centres for Disease Control and Prevention (2020) C2
March 2020 The number of African Union Member States reporting COVID- 19 cases is increasing and there is a likelihood of community transmission. The WHO recently modified the COVID-19 suspect case definition to include severe acute respiratory infection and advises testing of all severe acute res... more
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COVID-19 guidance for educational settings

African Union; Africa CDC Centres for Disease Control and Prevention (2020) C_CDC
This guidance will assist staff, students and caregivers in schools (including day care centres, pre-school, primary and secondary schools), higher educational institutions (including universities, research institutes) and other educational institutions with how to address coronavirus disease 2019 (... more
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Hand washing facility options for resource limited settings
recommended

African Union; Africa CDC Centres for Disease Control and Prevention (2020) C2
This document provides guidance to AU Member States, states/local bodies, and communities on how to construct and maintain non-contact hand washing stations like Tippy Taps and other alternative hand washing stations.
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Generic protocol for a population-based, age- and gender- stratified sero-survey study for SARS-CoV-2

African Union; Africa CDC Centres for Disease Control and Prevention (2020) C1
The number of confirmed COVID-19 cases detected and reported in each country is influenced by many factors including limited access and/or utilization of healthcare and COVID-19 testing, limited surveillance, lack of knowledge amongst the population about when to seek testing, an asymptomatic pres... more
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Implementation Guide for COVID-19 Vaccines in Africa
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African Union; Africa CDC Centres for Disease Control and Prevention; World Health Organization WHO, et al. (2021) C1
“Guide to facilitate the implementation of the WHO/UNICEF “Guidance on developing a national deployment and vaccination plan for COVID-19 vaccines” for Africa t contains action-oriented lists of critical topics to address and checklists tailored to the context of African Union Member States. ... more
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FAQs: Waste Management for COVID-19 in Healthcare Settings for Africa
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African Union; Africa CDC Centres for Disease Control and Prevention (2022) CC
Health care waste can be difficult to treat and dispose of safely. The environmental and health impacts of waste put extra pressure on resources. Therefore, it is important to try and reduce the quantities of waste wherever possible. Ensure waste is segregated properly at the point of disposal. It i... more
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Quality Assurance Framework for SARS-CoV-2 Antigen Rapid Testing for Diagnosis of COVID-19
recommended

African Union; Africa CDC Centres for Disease Control and Prevention; AMREF; ASLM; et al. (2021) CC
ASLM in collaboration with the Africa Centres for Disease Control and Prevention, and in partnership with the Clinton Health Access Initiative, Amref and Last Mile Health present the Quality Assurance Framework for SARS-CoV-2 Antigen Rapid Testing for Diagnosis of COVID-19. This framework aims to pr... more
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Guidance on Infection Prevention among Contact Tracers in Africa
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African Union; Africa CDC Centres for Disease Control and Prevention (2020) CC
Africa CDC will coordinate efforts to scale-up contact tracing by more than one million contact tracers. It is therefore critical that these contact tracers are adequately trained and equipped to avoid being infected.